CDS

Accession Number TCMCG017C34592
gbkey CDS
Protein Id OMO51956.1
Location join(29615..29689,29977..30090,30483..30539,31623..31724,31860..32010,32097..32173,32380..32490,33371..33441,33612..33753,34600..34698,34828..34956,35101..35215,36585..36652,37229..37342,37443..37559,37635..37688,37784..37922,39124..39254,39409..39472,39550..39652,39784..39817)
GeneID InterPro:IPR000565
Organism Corchorus olitorius
locus_tag COLO4_37451

Protein

Length 688aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01023986.1
Definition DNA topoisomerase, type IIA, subunit B [Corchorus olitorius]
Locus_tag COLO4_37451

EGGNOG-MAPPER Annotation

COG_category B
Description A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K02470        [VIEW IN KEGG]
EC 5.99.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003918        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009295        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0061505        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCATCTAACCTCACAACTGAAGCTTTCCACGAAAGCAAAAGCTCCAAAGCTTATAACTCCGAGCAAATTCAGGTTTACGAGATATTGGATAATGCTGTCGATGAGGCACAAGCTGGTTTTGCCACACAAATAGATGTTGTTTTACTTTCAGATGGTTCTGTGAGCACAACCGATAATGGACGAGGGATTCCAACTGACTTGCATCCTGTCACAAAGAAATCTGCCTTGGAGACAGTGTTGACGGTATTACATGCAGGTGGAAAGTTTGGTGGCTCAAGTAGCGGTTACAGTGTTTCTGGTGGTTTACATGGCGTGGGTTTATCTGTTGTCAATGCCTTATCTGAGGCGTTAGAAGTCACTGTTTGGAGGGATGGAATGGAATACCGGCAAAAGTATTCACGTGGGAAGCCTCTAAGCACACTAACATCTCATGTTCTTTCAACTGAATCAAAGGACCGCCAGGGGACACGCATTCAGTTTTGGCCTGATAAAAAAATATTTACCACTGCAATTGAGTTCGACTACAACACACTTGCTGGGCGAATTAGAGAGCTTGCTTTCCTGAATCCAAAGCTTACTATCACGCTTAAGAAAGAAGATAATGATCCAGAGAAGAGCGTATATAATGAATATTTCTTTGCTGGGGGCCTCGTCGAATATGTGAAATGGCTAAACATTGATAAGAAACCACTTCATGACGTGCTAGGTTTCAGCAGGCAAACAGATGGAATGACAATCGATGTTGCTCTCCAGTGGTGTTCGGATGCATATTCAGATACAATGTTGGGCTATGCCAATAGCATACGAACCATTGATGGTGGCACACATATAGAGGGGGTTAAGGCTTCCTTGACAAGAACTCTCAACAACCTCGGAAAGAAGTCAAAAATTATCAAGGAAAAGGATATAAGCTTAAGTGGTGAACATGTAAGGGAGGGACTGACATGTATTATATCTGTGAAAGTTCCAAATCCAGAATTTGAAGGACAAACAAAGACAAGATTGGGAAATCCTGAGGTGCGAAAAGTGGTTGATCAATCTGTCCAAGAGTTTCTTACTGAATATTTGGAGTTGCATCCGGATGTATTTGATTCAATCCTTTCCAAGTCACTAAATGCTTTTAAGGCAGCTCTTGCAGCAAAGAGAGCTAGGGAATTAGTCAGACAAAAGAGTGTGTTGAAATCATCATCTCTTCCTGGAAAATTAGCTGATTGTTCATCCACAAATCCGGAAGAATCTGAAATTTTCATAGTTGAAGGAGACTCAGCTGGTGGGAGTGCAAAGCAAGGCCGTGATAGGCGCTTTCAGGCTATTCTACCCCTGAGGGGTAAAATTCTTAACATTGAAAGGCGGGATGAGGCTGCAATGTACAAGAATGAAGAGATTCAAAATTTGATTCTTGGTCTTGGACTTGGGGTGAAGGGAGAGGATTTTAAAAAAGAAAACCTAAGATATCATAAGATCATCATCTTAACAGATGCTGATGTAGATGGTGCTCATATCCGTACTCTGTTGCTGACATTTTTCTTCAGATATCAGAGAGCCTTATTTGATGAAGGTTGCATTTATGTTGGCGTTCCACCCCTTTACAAGGTTGAAAGAGGAAAACAAGTATACTATTGTTATGATGATGCAGACCTTAAAAAGGTCCAAAGTTCATTCCCTCCAAATGCATCATACAACATTCAGAGATTCAAAGGCAAGGATAAATCCTCTCTCTCTCTTCCTGTTTGTCTGGGTGAGATGATGCCTGCTCAGTTGTGGGAAACAACAATGGATCCTGAGCAAAGGCTGCTGAAGCAATTAGTAGTTGAAGATGCGGCAGAAGCAAATATAGTATTTTCATCCCTAATGGGTGCTCGGTTCTTCTTGCCCTCTCTTGTGAACCTAGACACTGCATACGCAAAACCTTCTCAGCATGAATTCAGTGGATGCACGAAAGGAGTTGATCCAGAACTCTGCAAGCAGGATCAACCTCGACAAGCTGGATATATGAGGGTTGATTTGTTATATGACATACAAAGATTGTGGGACATGATCGATTTAGTTTGGTGGAGAGATTGA
Protein:  
MSSNLTTEAFHESKSSKAYNSEQIQVYEILDNAVDEAQAGFATQIDVVLLSDGSVSTTDNGRGIPTDLHPVTKKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYRQKYSRGKPLSTLTSHVLSTESKDRQGTRIQFWPDKKIFTTAIEFDYNTLAGRIRELAFLNPKLTITLKKEDNDPEKSVYNEYFFAGGLVEYVKWLNIDKKPLHDVLGFSRQTDGMTIDVALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNNLGKKSKIIKEKDISLSGEHVREGLTCIISVKVPNPEFEGQTKTRLGNPEVRKVVDQSVQEFLTEYLELHPDVFDSILSKSLNAFKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVYYCYDDADLKKVQSSFPPNASYNIQRFKGKDKSSLSLPVCLGEMMPAQLWETTMDPEQRLLKQLVVEDAAEANIVFSSLMGARFFLPSLVNLDTAYAKPSQHEFSGCTKGVDPELCKQDQPRQAGYMRVDLLYDIQRLWDMIDLVWWRD